CCGR Portal Facets

Assays

  • ATAC-STARR-seq
  • Flow-FISH CRISPR screen
  • Perturb-Seq
  • Proliferation screen

cCRE Category

  • PLS
  • pELS
  • dELS
  • CTCF-bound
  • CTCF-only
  • DNase-H3K4me3

cCRE Overlap

  • No overlaps
  • One overlap
  • Multiple overlaps

Cell Line

  • iPSC
  • k562
  • NPC
  • CD8
  • MCF-7
  • HCT116
  • DU 145
  • A549
  • NCI-H460
  • PC-3
  • MDA-MB-231
  • HepG2
  • SW620

Direction

  • Depleted Only
  • Enriched Only
  • Mixed
  • Non-significant

Experiment Source Type

  • gRNA
  • cCRE
  • CAR
  • DHS
  • Tested Element
  • Called Regulatory Element

Functional Characterization Modality

  • CRISPRi
  • CRISPRa
  • Reporter Assay

Genome Assembly

  • hg19
  • hg38

gRNA Type

  • Positive Control
  • Negative Control
  • Targeting

Promoter Classification

  • Promoter
  • Non-promoter

Tissue Type

  • Stem
  • Bone Marrow
  • T Cell
  • B Cell
  • Blood Cell
  • Breast
  • Colon
  • Prostate
  • Lung
  • Liver